LOCUS SI506_pSIH1_H1_cop 8062 bp ds-DNA circular 14-MAR-2011 DEFINITION ACCESSION VERSION SOURCE ORGANISM COMMENT COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers promoter 7..234 /vntifkey="29" /label=RSV\promoter /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature 3242..3295 /label=T2A /ApEinfo_fwdcolor=#ff80ff /ApEinfo_revcolor=green misc_feature complement(5780..6453) /vntifkey="21" /label=pUC\ORI /ApEinfo_fwdcolor=#0000ff /ApEinfo_revcolor=#8000ff misc_feature 3296..3895 /label=Puro /ApEinfo_fwdcolor=#ff00ff /ApEinfo_revcolor=green CDS complement(6598..7458) /vntifkey="4" /label=AmpR /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature 1798..1915 /vntifkey="21" /label=cPPT /ApEinfo_fwdcolor=#ffff80 /ApEinfo_revcolor=#8000ff misc_feature 4811..4816 /label=BamH I /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 4820..4825 /label=EcoRI /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 2486..3241 /label=copGFP /ApEinfo_fwdcolor=#00ff00 /ApEinfo_revcolor=green promoter 1927..2472 /vntifkey="29" /label=EF1\promoter /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink LTR 235..414 /vntifkey="19" /label=HIV\LTR /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature 567..919 /vntifkey="21" /label=Gag /ApEinfo_fwdcolor=#ff00ff /ApEinfo_revcolor=#8000ff misc_feature 1076..1308 /vntifkey="21" /label=RRE /ApEinfo_fwdcolor=#ffff00 /ApEinfo_revcolor=#8000ff misc_feature 1309..1797 /vntifkey="21" /label=env /ApEinfo_fwdcolor=#0000ff /ApEinfo_revcolor=#8000ff misc_feature join(3896..4430,4432..4434,4436..4484) /label=WPRE /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green misc_feature 4718..4808 /label=H1 promoter /ApEinfo_fwdcolor=#ff00ff /ApEinfo_revcolor=green misc_feature 4723..4746 /label=FGNF sequencing primer /ApEinfo_fwdcolor=#ffff00 /ApEinfo_revcolor=green misc_feature 5103..5410 /label=SV40 ori /ApEinfo_fwdcolor=cyan /ApEinfo_revcolor=green ORIGIN 1 acgcgtgtag tcttatgcaa tactcttgta gtcttgcaac atggtaacga tgagttagca 61 acatgcctta caaggagaga aaaagcaccg tgcatgccga ttggtggaag taaggtggta 121 cgatcgtgcc ttattaggaa ggcaacagac gggtctgaca tggattggac gaaccactga 181 attgccgcat tgcagagata ttgtatttaa gtgcctagct cgatacaata aacgggtctc 241 tctggttaga ccagatctga gcctgggagc tctctggcta actagggaac ccactgctta 301 agcctcaata aagcttgcct tgagtgcttc aagtagtgtg tgcccgtctg ttgtgtgact 361 ctggtaacta gagatccctc agaccctttt agtcagtgtg gaaaatctct agcagtggcg 421 cccgaacagg gacctgaaag cgaaagggaa accagagctc tctcgacgca ggactcggct 481 tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaaatttt 541 gactagcgga ggctagaagg agagagatgg gtgcgagagc gtcagtatta agcgggggag 601 aattagatcg cgatgggaaa aaattcggtt aaggccaggg ggaaagaaaa aatataaatt 661 aaaacatata gtatgggcaa gcagggagct agaacgattc gcagttaatc ctggcctgtt 721 agaaacatca gaaggctgta gacaaatact gggacagcta caaccatccc ttcagacagg 781 atcagaagaa cttagatcat tatataatac agtagcaacc ctctattgtg tgcatcaaag 841 gatagagata aaagacacca aggaagcttt agacaagata gaggaagagc aaaacaaaag 901 taagaccacc gcacagcaag cggccgctga tcttcagacc tggaggagga gatatgaggg 961 acaattggag aagtgaatta tataaatata aagtagtaaa aattgaacca ttaggagtag 1021 cacccaccaa ggcaaagaga agagtggtgc agagagaaaa aagagcagtg ggaataggag 1081 ctttgttcct tgggttcttg ggagcagcag gaagcactat gggcgcagcc tcaatgacgc 1141 tgacggtaca ggccagacaa ttattgtctg gtatagtgca gcagcagaac aatttgctga 1201 gggctattga ggcgcaacag catctgttgc aactcacagt ctggggcatc aagcagctcc 1261 aggcaagaat cctggctgtg gaaagatacc taaaggatca acagctcctg gggatttggg 1321 gttgctctgg aaaactcatt tgcaccactg ctgtgccttg gaatgctagt tggagtaata 1381 aatctctgga acagattgga atcacacgac ctggatggag tgggacagag aaattaacaa 1441 ttacacaagc ttaatacact ccttaattga agaatcgcaa aaccagcaag aaaagaatga 1501 acaagaatta ttggaattag ataaatgggc aagtttgtgg aattggttta acataacaaa 1561 ttggctgtgg tatataaaat tattcataat gatagtagga ggcttggtag gtttaagaat 1621 agtttttgct gtactttcta tagtgaatag agttaggcag ggatattcac cattatcgtt 1681 tcagacccac ctcccaaccc cgaggggacc cgacaggccc gaaggaatag aagaagaagg 1741 tggagagaga gacagagaca gatccattcg attagtgaac ggatctcgac ggttaacttt 1801 taaaagaaaa ggggggattg gggggtacag tgcaggggaa agaatagtag acataatagc 1861 aacagacata caaactaaag aattacaaaa acaaattaca aaattcaaaa ttttatcgat 1921 actagtaagg atctgcgatc gctccggtgc ccgtcagtgg gcagagcgca catcgcccac 1981 agtccccgag aagttggggg gaggggtcgg caattgaacg ggtgcctaga gaaggtggcg 2041 cggggtaaac tgggaaagtg atgtcgtgta ctggctccgc ctttttcccg agggtggggg 2101 agaaccgtat ataagtgcag tagtcgccgt gaacgttctt tttcgcaacg ggtttgccgc 2161 cagaacacag ctgaagcttc gaggggctcg catctctcct tcacgcgccc gccgccctac 2221 ctgaggccgc catccacgcc ggttgagtcg cgttctgccg cctcccgcct gtggtgcctc 2281 ctgaactgcg tccgccgtct aggtaagttt aaagctcagg tcgagaccgg gcctttgtcc 2341 ggcgctccct tggagcctac ctagactcag ccggctctcc acgctttgcc tgaccctgct 2401 tgctcaactc tacgtctttg tttcgttttc tgttctgcgc cgttacagat ccaagctgtg 2461 accggcgcct actctagaCG CCACCatgga gagcgacgag agcggcctgc ccgccatgga 2521 gatcgagtgc cgcatcaccg gcaccctgaa cggcgtggag ttcgagctgg tgggcggcgg 2581 agagggcacc cccaagcagg gccgcatgac caacaagatg aagagcacca aaggcgccct 2641 gaccttcagc ccctacctgc tgagccacgt gatgggctac ggcttctacc acttcggcac 2701 ctaccccagc ggctacgaga accccttcct gcacgccatc aacaacggcg gctacaccaa 2761 cacccgcatc gagaagtacg aggacggcgg cgtgctgcac gtgagcttca gctaccgctg 2821 cgaggccggc cgcgtgatcg gcgacttcaa ggtggtgggc accggcttcc ccgaggacag 2881 cgtgatcttc accgacaaga tcatccgcag caacgccacc gtggagcacc tgcaccccat 2941 gggcgataac gtgctggtgg gcagcttcgc ccgcaccttc agcctgcgcg acggcggcta 3001 ccacagcttc gtggtggaca accacatgca cttcaagagc gccatccacc ccagcatcct 3061 gcagaacggg ggccccatgt tcgccttccg ccgcgtggag gagctgcaca gcaacaccga 3121 gctgggcatc gtggagtacc agcacgcctt caagaccccc atcgccttcg ccagatcccg 3181 cgctcagtcg tccaattctg ccgtggacgg caccgccgga cccggctcca ccggatctcg 3241 cGAGGGCAGA GGAAGTCTTC TAACATGCGG TGACGTGGAG GAGAATCCCG GCCCTatgac 3301 cgagtacaag cccacggtgc gcctcgccac ccgcgacgac gtccccaggg ccgtacgcac 3361 cctcgccgcc gcgttcgccg actaccccgc cacgcgccac accgtcgatc cggaccgcca 3421 catcgagcgg gtcaccgagc tgcaagaact cttcctcacg cgcgtcgggc tcgacatcgg 3481 caaggtgtgg gtcgcggacg acggcgccgc ggtggcggtc tggaccacgc cggagagcgt 3541 cgaagcgggg gcggtgttcg ccgagatcgg cccgcgcatg gccgagttga gcggttcccg 3601 gctggccgcg cagcaacaga tggaaggcct cctggcgccg caccggccca aggagcccgc 3661 gtggttcctg gccaccgtcg gcgtctcgcc cgaccaccag ggcaagggtc tgggcagcgc 3721 cgtcgtgctc cccggagtgg aggcggccga gcgcgccggg gtgcccgcct tcctggagac 3781 ctccgcgccc cgcaacctcc ccttctacga gcggctcggc ttcaccgtca ccgccgacgt 3841 cgaggtgccc gaaggaccgc gcacctggtg catgacccgc aagcccggtg cctgaaatca 3901 acctctggat tacaaaattt gtgaaagatt gactggtatt cttaactatg ttgctccttt 3961 tacgctatgt ggatacgctg ctttaatgcc tttgtatcat gctattgctt cccgtatggc 4021 tttcattttc tcctccttgt ataaatcctg gttgctgtct ctttatgagg agttgtggcc 4081 cgttgtcagg caacgtggcg tggtgtgcac tgtgtttgct gacgcaaccc ccactggttg 4141 gggcattgcc accacctgtc agctcctttc cgggactttc gctttccccc tccctattgc 4201 cacggcggaa ctcatcgccg cctgccttgc ccgctgctgg acaggggctc ggctgttggg 4261 cactgacaat tccgtggtgt tgtcggggaa gctgacgtcc tttccatggc tgctcgcctg 4321 tgttgccacc tggattctgc gcgggacgtc cttctgctac gtcccttcgg ccctcaatcc 4381 agcggacctt ccttcccgcg gcctgctgcc ggctctgcgg cctcttccgc GtctCcgcct 4441 tcgccctcag acgagtcgga tctccctttg gccgcctccc cgcctggtac ctttaagacc 4501 aatgacttac aaggcagctg tagatcttag ccacttttta aaagaaaagg ggggactgga 4561 agggctaatt cactcccaac gatgtcaaga attggaacgc tgacgtcatc aacccgctcc 4621 aaggaatcgc gggcccagtg tcactaggcg ggaacaccca gcgcgcgtgc gcctggcagg 4681 aagatggctg tgagggacag gggagtggcg ccctgcaata tttgcatgtc gctatgtgtt 4741 ctgggaaatc accataaacg tgaaatgtct ttggatttgg gaatcttata agttctgtat 4801 gagaccactt ggatcctctg aattcttcga tTctgctttt tgcttctact gggtctctct 4861 ggttagacca gatctgagcc tgggagctct ctggctaact agggaaccca ctgcttaagc 4921 ctcaataaag cttgccttga gtgcttcaag tagtgtgtgc ccgtctgttg tgtgactctg 4981 gtaactagag atccctcaga cccttttagt cagtgtggaa aatctctagc agtagtagtt 5041 catgtcatct tattattcag tatttataac ttgcaaagaa atgaatatca gagagtgaga 5101 ggaacttgtt tattgcagct tataatggtt acaaataaag caatagcatc acaaatttca 5161 caaataaagc atttttttca ctgcattcta gttgtggttt gtccaaactc atcaatgtat 5221 cttatcatgt ctggctctag ctatcccgcc cctaactccg cccaTCCCGC CCCTAACTCC 5281 GCCCAgttcc gcccattctc cgccccatgg ctgactaatt ttttttattt atgcagaggc 5341 cgaggccgcc tcggcctctg agctattcca gaagtagtga ggaggctttt ttggaggcct 5401 agacttttgc agagacggcc caaattcgta atcatggtca tagctgtttc ctgtgtgaaa 5461 ttgttatccg ctcacaattc cacacaacat acgagccgga agcataaagt gtaaagcctg 5521 gggtgcctaa tgagtgagct aactcacatt aattgcgttg cgctcactgc ccgctttcca 5581 gtcgggaaac ctgtcgtgcc agctgcatta atgaatcggc caacgcgcgg ggagaggcgg 5641 tttgcgtatt gggcgctctt ccgcttcctc gctcactgac tcgctgcgct cggtcgttcg 5701 gctgcggcga gcggtatcag ctcactcaaa ggcggtaata cggttatcca cagaatcagg 5761 ggataacgca ggaaagaaca tgtgagcaaa aggccagcaa aaggccagga accgtaaaaa 5821 ggccgcgttg ctggcgtttt tccataggct ccgcccccct gacgagcatc acaaaaatcg 5881 acgctcaagt cagaggtggc gaaacccgac aggactataa agataccagg cgtttccccc 5941 tggaagctcc ctcgtgcgct ctcctgttcc gaccctgccg cttaccggat acctgtccgc 6001 ctttctccct tcgggaagcg tggcgctttc tcatagctca cgctgtaggt atctcagttc 6061 ggtgtaggtc gttcgctcca agctgggctg tgtgcacgaa ccccccgttc agcccgaccg 6121 ctgcgcctta tccggtaact atcgtcttga gtccaacccg gtaagacacg acttatcgcc 6181 actggcagca gccactggta acaggattag cagagcgagg tatgtaggcg gtgctacaga 6241 gttcttgaag tggtggccta actacggcta cactagaagg acagtatttg gtatctgcgc 6301 tctgctgaag ccagttacct tcggaaaaag agttggtagc tcttgatccg gcaaacaaac 6361 caccgctggt agcggtggtt tttttgtttg caagcagcag attacgcgca gaaaaaaagg 6421 atctcaagaa gatcctttga tcttttctac ggggtctgac gctcagtgga acgaaaactc 6481 acgttaaggg attttggtca tgagattatc aaaaaggatc ttcacctaga tccttttaaa 6541 ttaaaaatga agttttaaat caatctaaag tatatatgag taaacttggt ctgacagtta 6601 ccaatgctta atcagtgagg cacctatctc agcgatctgt ctatttcgtt catccatagt 6661 tgcctgactc cccgtcgtgt agataactac gatacgggag ggcttaccat ctggccccag 6721 tgctgcaatg ataccgcgag acccacgctc accggctcca gatttatcag caataaacca 6781 gccagccgga agggccgagc gcagaagtgg tcctgcaact ttatccgcct ccatccagtc 6841 tattaattgt tgccgggaag ctagagtaag tagttcgcca gttaatagtt tgcgcaacgt 6901 tgttgccatt gctacaggca tcgtggtgtc acgctcgtcg tttggtatgg cttcattcag 6961 ctccggttcc caacgatcaa ggcgagttac atgatccccc atgttgtgca aaaaagcggt 7021 tagctccttc ggtcctccga tcgttgtcag aagtaagttg gccgcagtgt tatcactcat 7081 ggttatggca gcactgcata attctcttac tgtcatgcca tccgtaagat gcttttctgt 7141 gactggtgag tactcaacca agtcattctg agaatagtgt atgcggcgac cgagttgctc 7201 ttgcccggcg tcaatacggg ataataccgc gccacatagc agaactttaa aagtgctcat 7261 cattggaaaa cgttcttcgg ggcgaaaact ctcaaggatc ttaccgctgt tgagatccag 7321 ttcgatgtaa cccactcgtg cacccaactg atcttcagca tcttttactt tcaccagcgt 7381 ttctgggtga gcaaaaacag gaaggcaaaa tgccgcaaaa aagggaataa gggcgacacg 7441 gaaatgttga atactcatac tcttcctttt tcaatattat tgaagcattt atcagggtta 7501 ttgtctcatg agcggataca tatttgaatg tatttagaaa aataaacaaa taggggttcc 7561 gcgcacattt ccccgaaaag tgccacctga cgtctaagaa accattatta tcatgacatt 7621 aacctataaa aataggcgta tcacgaggcc ctttcgtctc gcgcgtttcg gtgatgacgg 7681 tgaaaacctc tgacacatgc agctcccgga gacggtcaca gcttgtctgt aagcggatgc 7741 cgggagcaga caagcccgtc agggcgcgtc agcgggtgtt ggcgggtgtc ggggctggct 7801 taactatgcg gcatcagagc agattgtact gagagtgcac catatgcggt gtgaaatacc 7861 gcacagatgc gtaaggagaa aataccgcat caggcgccat tcgccattca ggctgcgcaa 7921 ctgttgggaa gggcgatcgg tgcgggcctc ttcgctatta cgccagctgg cgaaaggggg 7981 atgtgctgca aggcgattaa gttgggtaac gccagggttt tcccagtcac gacgttgtaa 8041 aacgacggcc agtgccaagc tg //