LOCUS CD501A_1_pCDH_CMV_ 6231 bp ds-DNA circular 09-MAY-2011 SOURCE ORGANISM COMMENT This file is best viewed with a free Vector NTI Viewer: COMMENT ApEinfo:methylated:1 FEATURES Location/Qualifiers misc_feature 2326..2916 /vntifkey="21" /label=WPRE /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink promoter 7..234 /vntifkey="29" /label=RSV\promoter /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature 3293..3424 /vntifkey="21" /label=SV40\EEL\poly(A)s /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature 1798..1916 /vntifkey="21" /label=cPPT /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink LTR 235..414 /vntifkey="19" /label=HIV\LTR /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature 3433..3579 /vntifkey="21" /label=SV40\Ori /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink LTR 2988..3221 /vntifkey="19" /label=3'dLTR /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink CDS complement(4767..5627) /vntifkey="4" /label=AmpR /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink promoter 1922..2271 /vntifkey="30" /label=CMV7\promoter /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature 567..919 /vntifkey="21" /label=Gag /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature 1076..1308 /vntifkey="21" /label=RRE /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature 1309..1797 /vntifkey="21" /label=env /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink misc_feature complement(3949..4622) /vntifkey="21" /label=pUC\ORI /ApEinfo_fwdcolor=pink /ApEinfo_revcolor=pink ORIGIN 1 acgcgtgtag tcttatgcaa tactcttgta gtcttgcaac atggtaacga tgagttagca 61 acatgcctta caaggagaga aaaagcaccg tgcatgccga ttggtggaag taaggtggta 121 cgatcgtgcc ttattaggaa ggcaacagac gggtctgaca tggattggac gaaccactga 181 attgccgcat tgcagagata ttgtatttaa gtgcctagct cgatacaata aacgggtctc 241 tctggttaga ccagatctga gcctgggagc tctctggcta actagggaac ccactgctta 301 agcctcaata aagcttgcct tgagtgcttc aagtagtgtg tgcccgtctg ttgtgtgact 361 ctggtaacta gagatccctc agaccctttt agtcagtgtg gaaaatctct agcagtggcg 421 cccgaacagg gacctgaaag cgaaagggaa accagagctc tctcgacgca ggactcggct 481 tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaaatttt 541 gactagcgga ggctagaagg agagagatgg gtgcgagagc gtcagtatta agcgggggag 601 aattagatcg cgatgggaaa aaattcggtt aaggccaggg ggaaagaaaa aatataaatt 661 aaaacatata gtatgggcaa gcagggagct agaacgattc gcagttaatc ctggcctgtt 721 agaaacatca gaaggctgta gacaaatact gggacagcta caaccatccc ttcagacagg 781 atcagaagaa cttagatcat tatataatac agtagcaacc ctctattgtg tgcatcaaag 841 gatagagata aaagacacca aggaagcttt agacaagata gaggaagagc aaaacaaaag 901 taagaccacc gcacagcaag cggccactga tcttcagacc tggaggagga gatatgaggg 961 acaattggag aagtgaatta tataaatata aagtagtaaa aattgaacca ttaggagtag 1021 cacccaccaa ggcaaagaga agagtggtgc agagagaaaa aagagcagtg ggaataggag 1081 ctttgttcct tgggttcttg ggagcagcag gaagcactat gggcgcagcc tcaatgacgc 1141 tgacggtaca ggccagacaa ttattgtctg gtatagtgca gcagcagaac aatttgctga 1201 gggctattga ggcgcaacag catctgttgc aactcacagt ctggggcatc aagcagctcc 1261 aggcaagaat cctggctgtg gaaagatacc taaaggatca acagctcctg gggatttggg 1321 gttgctctgg aaaactcatt tgcaccactg ctgtgccttg gaatgctagt tggagtaata 1381 aatctctgga acagattgga atcacacgac ctggatggag tgggacagag aaattaacaa 1441 ttacacaagc ttaatacact ccttaattga agaatcgcaa aaccagcaag aaaagaatga 1501 acaagaatta ttggaattag ataaatgggc aagtttgtgg aattggttta acataacaaa 1561 ttggctgtgg tatataaaat tattcataat gatagtagga ggcttggtag gtttaagaat 1621 agtttttgct gtactttcta tagtgaatag agttaggcag ggatattcac cattatcgtt 1681 tcagacccac ctcccaaccc cgaggggacc cgacaggccc gaaggaatag aagaagaagg 1741 tggagagaga gacagagaca gatccattcg attagtgaac ggatctcgac ggttaacttt 1801 taaaagaaaa ggggggattg gggggtacag tgcaggggaa agaatagtag acataatagc 1861 aacagacata caaactaaag aattacaaaa acaaattaca aaaattcaaa attttatcga 1921 tactagtatt atgcccagta catgacctta tgggactttc ctacttggca gtacatctac 1981 gtattagtca tcgctattac catggtgatg cggttttggc agtacatcaa tgggcgtgga 2041 tagcggtttg actcacgggg atttccaagt ctccacccca ttgacgtcaa tgggagtttg 2101 ttttggcacc aaaatcaacg ggactttcca aaatgtcgta acaactccgc cccattgacg 2161 caaatgggcg gtaggcgtgt acggtgggag gtctatataa gcagagctcg tttagtgaac 2221 cgtcagatcg cctggagacg ccatccacgc tgttttgacc tccatagaag attctagagt 2281 cgacgcggcc gcggatccat ttaaattcga attcgctagc tcgacaatca acctctggat 2341 tacaaaattt gtgaaagatt gactggtatt cttaactatg ttgctccttt tacgctatgt 2401 ggatacgctg ctttaatgcc tttgtatcat gctattgctt cccgtatggc tttcattttc 2461 tcctccttgt ataaatcctg gttgctgtct ctttatgagg agttgtggcc cgttgtcagg 2521 caacgtggcg tggtgtgcac tgtgtttgct gacgcaaccc ccactggttg gggcattgcc 2581 accacctgtc agctcctttc cgggactttc gctttccccc tccctattgc cacggcggaa 2641 ctcatcgccg cctgccttgc ccgctgctgg acaggggctc ggctgttggg cactgacaat 2701 tccgtggtgt tgtcggggaa atcatcgtcc tttccttggc tgctcgcctg tgttgccacc 2761 tggattctgc gcgggacgtc cttctgctac gtcccttcgg ccctcaatcc agcggacctt 2821 ccttcccgcg gcctgctgcc ggctctgcgg cctcttccgc gtcttcgcct tcgccctcag 2881 acgagtcgga tctccctttg ggccgcctcc ccgcctggta cctttaagac caatgactta 2941 caaggcagct gtagatctta gccacttttt aaaagaaaag gggggactgg aagggctaat 3001 tcactcccaa cgaaaataag atctgctttt tgcttgtact gggtctctct ggttagacca 3061 gatctgagcc tgggagctct ctggctaact agggaaccca ctgcttaagc ctcaataaag 3121 cttgccttga gtgcttcaag tagtgtgtgc ccgtctgttg tgtgactctg gtaactagag 3181 atccctcaga cccttttagt cagtgtggaa aatctctagc agtagtagtt catgtcatct 3241 tattattcag tatttataac ttgcaaagaa atgaatatca gagagtgaga ggaacttgtt 3301 tattgcagct tataatggtt acaaataaag caatagcatc acaaatttca caaataaagc 3361 atttttttca ctgcattcta gttgtggttt gtccaaactc atcaatgtat cttatcatgt 3421 ctggctctag ctatcccgcc cctaactccg cccagttccg cccattctcc gccccatggc 3481 tgactaattt tttttattta tgcagaggcc gaggccgcct cggcctctga gctattccag 3541 aagtagtgag gaggcttttt tggaggccta gacttttgca gagacggccc aaattcgtaa 3601 tcatggtcat agctgtttcc tgtgtgaaat tgttatccgc tcacaattcc acacaacata 3661 cgagccggaa gcataaagtg taaagcctgg ggtgcctaat gagtgagcta actcacatta 3721 attgcgttgc gctcactgcc cgctttccag tcgggaaacc tgtcgtgcca gctgcattaa 3781 tgaatcggcc aacgcgcggg gagaggcggt ttgcgtattg ggcgctcttc cgcttcctcg 3841 ctcactgact cgctgcgctc ggtcgttcgg ctgcggcgag cggtatcagc tcactcaaag 3901 gcggtaatac ggttatccac agaatcaggg gataacgcag gaaagaacat gtgagcaaaa 3961 ggccagcaaa aggccaggaa ccgtaaaaag gccgcgttgc tggcgttttt ccataggctc 4021 cgcccccctg acgagcatca caaaaatcga cgctcaagtc agaggtggcg aaacccgaca 4081 ggactataaa gataccaggc gtttccccct ggaagctccc tcgtgcgctc tcctgttccg 4141 accctgccgc ttaccggata cctgtccgcc tttctccctt cgggaagcgt ggcgctttct 4201 catagctcac gctgtaggta tctcagttcg gtgtaggtcg ttcgctccaa gctgggctgt 4261 gtgcacgaac cccccgttca gcccgaccgc tgcgccttat ccggtaacta tcgtcttgag 4321 tccaacccgg taagacacga cttatcgcca ctggcagcag ccactggtaa caggattagc 4381 agagcgaggt atgtaggcgg tgctacagag ttcttgaagt ggtggcctaa ctacggctac 4441 actagaagga cagtatttgg tatctgcgct ctgctgaagc cagttacctt cggaaaaaga 4501 gttggtagct cttgatccgg caaacaaacc accgctggta gcggtggttt ttttgtttgc 4561 aagcagcaga ttacgcgcag aaaaaaagga tctcaagaag atcctttgat cttttctacg 4621 gggtctgacg ctcagtggaa cgaaaactca cgttaaggga ttttggtcat gagattatca 4681 aaaaggatct tcacctagat ccttttaaat taaaaatgaa gttttaaatc aatctaaagt 4741 atatatgagt aaacttggtc tgacagttac caatgcttaa tcagtgaggc acctatctca 4801 gcgatctgtc tatttcgttc atccatagtt gcctgactcc ccgtcgtgta gataactacg 4861 atacgggagg gcttaccatc tggccccagt gctgcaatga taccgcgaga cccacgctca 4921 ccggctccag atttatcagc aataaaccag ccagccggaa gggccgagcg cagaagtggt 4981 cctgcaactt tatccgcctc catccagtct attaattgtt gccgggaagc tagagtaagt 5041 agttcgccag ttaatagttt gcgcaacgtt gttgccattg ctacaggcat cgtggtgtca 5101 cgctcgtcgt ttggtatggc ttcattcagc tccggttccc aacgatcaag gcgagttaca 5161 tgatccccca tgttgtgcaa aaaagcggtt agctccttcg gtcctccgat cgttgtcaga 5221 agtaagttgg ccgcagtgtt atcactcatg gttatggcag cactgcataa ttctcttact 5281 gtcatgccat ccgtaagatg cttttctgtg actggtgagt actcaaccaa gtcattctga 5341 gaatagtgta tgcggcgacc gagttgctct tgcccggcgt caatacggga taataccgcg 5401 ccacatagca gaactttaaa agtgctcatc attggaaaac gttcttcggg gcgaaaactc 5461 tcaaggatct taccgctgtt gagatccagt tcgatgtaac ccactcgtgc acccaactga 5521 tcttcagcat cttttacttt caccagcgtt tctgggtgag caaaaacagg aaggcaaaat 5581 gccgcaaaaa agggaataag ggcgacacgg aaatgttgaa tactcatact cttccttttt 5641 caatattatt gaagcattta tcagggttat tgtctcatga gcggatacat atttgaatgt 5701 atttagaaaa ataaacaaat aggggttccg cgcacatttc cccgaaaagt gccacctgac 5761 gtctaagaaa ccattattat catgacatta acctataaaa ataggcgtat cacgaggccc 5821 tttcgtctcg cgcgtttcgg tgatgacggt gaaaacctct gacacatgca gctcccggag 5881 acggtcacag cttgtctgta agcggatgcc gggagcagac aagcccgtca gggcgcgtca 5941 gcgggtgttg gcgggtgtcg gggctggctt aactatgcgg catcagagca gattgtactg 6001 agagtgcacc atatgcggtg tgaaataccg cacagatgcg taaggagaaa ataccgcatc 6061 aggcgccatt cgccattcag gctgcgcaac tgttgggaag ggcgatcggt gcgggcctct 6121 tcgctattac gccagctggc gaaaggggga tgtgctgcaa ggcgattaag ttgggtaacg 6181 ccagggtttt cccagtcacg acgttgtaaa acgacggcca gtgccaagct g //